Skip to Content
A stool culture is a test on a stool sample to find germs (such as bacteria or a fungus) that can cause an infection. A sample of stool is added to a substance that promotes the growth of germs. If no germs grow, the culture is negative. If germs that can cause infection grow, the culture is positive. The type of germ may be identified using a microscope or chemical tests. Sometimes other tests are done to find the right medicine for treating the infection. This is called sensitivity testing.
Depending on what
your stool is being tested for, you may only need to collect one stool sample. Or you may need several stool samples over a period of days.
A stool culture is done to:
You do not need to do anything special to prepare for this test.
Tell your doctor if you have recently taken
antibiotics, traveled out of the country, drunk untreated water, or
had a recent test with
contrast material, such as a barium swallow or a barium enema.
Talk to your doctor
about any concerns you have about the need for the test, its risks, how it
will be done, or what the results will mean. To help you understand the
importance of this test, fill out the
medical test information form(What is a PDF document?).
Stool samples can be collected at home. Or you may need to go to your doctor's office, a medical clinic, or the hospital. If you
collect the samples at home, you may be given a special container.
You may need to collect more than one sample. Follow the same steps
for each sample.
To collect the sample:
Take the sample to your doctor's office or the
lab as soon as you can. You may need to take your sample to the lab within a certain time, usually within 30 minutes or less of collecting it. Tell your doctor if you think you may have trouble
getting the sample to the lab on time.
Samples from babies and young
children may be taken from diapers (if the stool does not have urine mixed with it). Or a narrow tube may be put into the baby's rectum
while you hold the baby on your lap.
Sometimes a stool sample
is collected using a rectal swab. The swab is
inserted into the rectum, rotated gently, and then pulled out. It is placed in a
clean, dry container and sent to the lab right away.
Most people do not feel pain when they collect a stool sample.
If your doctor collects the stool
sample using a cotton swab, you may feel some pressure or discomfort as the
cotton swab is inserted into your rectum.
There is no chance for problems while collecting
a stool sample.
Be sure to wear gloves when you collect the sample. Wash
your hands before and after you collect the sample. This will help protect you
from spreading an infection.
A stool culture is done to find
bacteria, viruses, parasites, or fungi that may be causing an infection.
culture test results usually take 2 to 3 days. But some cultures for fungus and parasites may take weeks to get results.
No disease-causing bacteria, fungi, parasites, or viruses are present or grow in the culture.
Bacteria (such as
salmonella, shigella, or certain types of
E. coli) grow in the culture. Fungi such as yeast are found in the stool.
If bacteria are found in the culture,
sensitivity testing may be done to help choose the
Your stool also may be looked at under a microscope to check for parasites such as Giardia.
You may not be able to
have the test, or the results may not be helpful, if:
Other Works Consulted
Chernecky CC, Berger BJ (2008). Laboratory Tests and Diagnostic Procedures, 5th ed. St. Louis: Saunders.
Fischbach FT, Dunning MB III, eds. (2009). Manual of Laboratory and Diagnostic Tests, 8th ed. Philadelphia: Lippincott Williams and Wilkins.
Pagana KD, Pagana TJ (2010). Mosby’s Manual of Diagnostic and Laboratory Tests, 4th ed. St. Louis: Mosby Elsevier.
ByHealthwise StaffPrimary Medical ReviewerAdam Husney, MD - Family MedicineE. Gregory Thompson, MD - Internal MedicineSpecialist Medical ReviewerJerome B. Simon, MD, FRCPC, FACP - Gastroenterology
Current as ofFebruary 19, 2016
Current as of:
February 19, 2016
Adam Husney, MD - Family Medicine & E. Gregory Thompson, MD - Internal Medicine & Jerome B. Simon, MD, FRCPC, FACP - Gastroenterology
To learn more about Healthwise, visit Healthwise.org.
© 1995-2016 Healthwise, Incorporated. Healthwise, Healthwise for every health decision, and the Healthwise logo are trademarks of Healthwise, Incorporated.
© Copyright 2016 Rush-Copley Medical Center • 2000 Ogden Avenue; Aurora, IL 60504
Main: 630-978-6200 • Physician Referral & Information: 630-978-6700 or 866-4COPLEY (866-426-7539)